STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_0361Recombinase B. (841 aa)    
Predicted Functional Partners:
Lmac_1652
UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily.
 
 
 0.998
Lmac_0360
Hypothetical protein.
       0.814
Lmac_0359
Hypothetical protein.
       0.717
Lmac_0362
Nucleoside-diphosphate sugar epimerase.
       0.635
Lmac_0650
OsmC-like protein.
   
    0.511
Lmac_3079
Coiled-coil protein.
  
     0.504
Lmac_1506
Hypothetical protein.
  
     0.459
Lmac_2673
Protein IcmB (DotO).
  
     0.443
Lmac_0358
Cardiac ankyrin repeat-containing protein.
       0.439
Lmac_0605
Hypothetical protein.
  
     0.412
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.