STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sufSSelenocysteine lyase, PLP-dependent; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. (415 aa)    
Predicted Functional Partners:
nifU
Nitrogen fixation protein NifU.
 
 0.997
Lmac_0371
ATP transporter ATP- binding protein.
 
  
 0.991
Lmac_0372
Cysteine desulfurase.
 
 
 0.990
Lmac_0370
ABC transporter permease.
 
 
 0.988
Lmac_1742
Putative iron-sulpher cluster proteins NifU.
  
 0.972
Lmac_2852
Endonuclease/exonuclease/phosphatase family protein.
    
   0.909
Lmac_0367
Metal-sulfur cluster biosynthetic enzyme.
 
  
 0.905
poxA
lysyl-tRNA synthetase.
       0.798
Lmac_0373
Rrf2 family transporter protein.
       0.798
trxB
Thioredoxin reductase.
 
 
  0.675
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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