STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_0400Regulator of chromosome condensation (RCC1) repeat protein. (428 aa)    
Predicted Functional Partners:
nuoM
NADH-quinone oxidoreductase chain M.
    
 
 0.970
Lmac_2851
Subtilisin-like serine protease.
  
 0.953
yjeA
Endo-1,4-beta-xylanase.
  
 
 0.882
Lmac_0406
Sulfate transporter.
    
   0.873
ychM
Transporter.
    
   0.873
Lmac_1753
Clostripain family protein.
    
  0.868
Lmac_3048
SET domain protein.
  
 
 0.856
Lmac_0290
Eukaryotic huntingtin interacting protein B.
  
 
 0.828
Lmac_0037
Rho GTPase (Miro-like).
  
 
 0.801
Lmac_2173
Phosphoprotein phosphatase.
  
 
   0.780
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.