STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfa_1Cyclopropane fatty acyl phospholipid synthase. (378 aa)    
Predicted Functional Partners:
Lmac_1453
Flavin containing amine oxidoreductase.
  
 0.949
Lmac_2148
Polyketide synthase module.
  
 
 0.620
Lmac_1452
Hypothetical protein.
 
  
 0.579
valS
valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
       0.572
Lmac_1812
Peptide synthetase, non-ribosomal.
    
 0.526
Lmac_2756
Non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.517
Lmac_2147
Acetyltransferase.
 
   
 0.511
pksJ
Polyketide synthase, type I.
     
 0.490
cfa_2
Cyclopropane fatty acyl phospholipid synthase; Belongs to the class I-like SAM-binding methyltransferase superfamily. gTMT family.
  
     0.476
Lmac_1430
Non-ribosomal peptide synthetase/polyketide synthetase.
     
 0.459
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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