STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugpCSn-glycerol-3-phosphate transport, ATP binding protein; Belongs to the ABC transporter superfamily. (363 aa)    
Predicted Functional Partners:
ugpA
Sn-glycerol-3-phosphate transmembrane ABC transporter.
 
 0.999
ugpE
Sn-glycerol-3-phosphate transmembrane ABC transporter; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 0.999
ugpB
Glycerol-3-phosphate-binding periplasmic protein precursor.
 
 0.996
Lmac_0545
Hypothetical protein.
  
    0.899
Lmac_0546
Hydrolase/acyltransferase.
       0.799
potA-2
Spermidine/putrescine ABC transporter, ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
  
 
0.756
potC
Spermidine/putrescine transport system permease potC.
 
  
 0.688
potB
Spermidine/putrescine ABC transporter permease PotB.
 
  
 0.670
potD
Spermidine/putrescine-binding periplasmic protein PotD; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
  
 0.625
Lmac_2439
Beta-phosphoglucomutase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
     
 0.618
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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