Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lmac_0568Aminotransferase class V. (396 aa)    
Predicted Functional Partners:
nifU
Nitrogen fixation protein NifU.
 
 0.949
Lmac_1742
Putative iron-sulpher cluster proteins NifU.
  
 0.929
Lmac_0371
ATP transporter ATP- binding protein.
 
  
 0.887
Lmac_0372
Cysteine desulfurase.
 
 
 0.806
Lmac_0370
ABC transporter permease.
 
 
 0.795
Lmac_2852
Endonuclease/exonuclease/phosphatase family protein.
    
   0.743
Lmac_2907
Sulfurylase ThiF.
  
 
 0.704
cpsB_1
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
  0.590
cpsB_2
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
  0.590
trxB
Thioredoxin reductase.
   
 
  0.581
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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