STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_0590Glutamine ABC transporter periplasmic protein. (386 aa)    
Predicted Functional Partners:
hutH
Histidine ammonia-lyase (Histidase).
     
 0.774
Lmac_3048
SET domain protein.
  
     0.740
Lmac_0037
Rho GTPase (Miro-like).
  
     0.728
Lmac_1768
HEAT repeat protein.
  
     0.713
Lmac_2173
Phosphoprotein phosphatase.
  
     0.711
Lmac_1639
Ankyrin repeat protein.
  
     0.709
Lmac_2775
HEAT repeat protein.
  
     0.706
Lmac_0290
Eukaryotic huntingtin interacting protein B.
  
     0.685
Lmac_0571
Thaumatin domain-containing protein.
  
     0.683
Lmac_0616
HEAT repeat protein.
  
     0.683
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.