Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
avrBs3_1Avirulence protein AvrBs3. (808 aa)    
Predicted Functional Partners:
Lmac_1645
Protein with a bacterial immunoglobulin-like domain protein.
  
     0.765
Lmac_2327
Phosphotransferase enzyme family protein.
  
     0.746
Lmac_1018
Hypothetical protein.
    
  0.732
Lmac_2814
Protein LvrA.
  
     0.729
Lmac_2442
Glycosyl transferase family 2.
  
 
 0.722
Lmac_2436
PAS fold protein.
  
 
 0.701
Lmac_3045
Cysteine protease.
  
 
   0.666
ant1
Streptomycin 3''-adenylyltransferase; Mediates bacterial resistance to the antibiotics streptomycin and spectomycin.
  
     0.639
Lmac_0823
Sensory box sensor histidine kinase/response regulator.
    
 0.628
Lmac_1280
Sensory histidine-kinase / response regulator.
    
 0.628
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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