Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lmac_0333 | hypF | Lmac_0333 | Lmac_0642 | Acylphosphatase. | Hydrogenase maturation protein HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. | 0.667 |
| Lmac_0635 | Lmac_0636 | Lmac_0635 | Lmac_0636 | Coenzyme F420-reducing hydrogenase, alpha subunit. | Sulfhydrogenase subunit delta. | 0.998 |
| Lmac_0635 | hypA | Lmac_0635 | Lmac_0644 | Coenzyme F420-reducing hydrogenase, alpha subunit. | Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | 0.550 |
| Lmac_0635 | hypB | Lmac_0635 | Lmac_0643 | Coenzyme F420-reducing hydrogenase, alpha subunit. | Hydrogenase nickel incorporation protein HypB. | 0.566 |
| Lmac_0635 | hypC | Lmac_0635 | Lmac_0641 | Coenzyme F420-reducing hydrogenase, alpha subunit. | Hydrogenase expression/formation protein HypC. | 0.610 |
| Lmac_0635 | hypD | Lmac_0635 | Lmac_0640 | Coenzyme F420-reducing hydrogenase, alpha subunit. | Hydrogenase expression/formation protein HypD; Belongs to the HypD family. | 0.719 |
| Lmac_0635 | hypE | Lmac_0635 | Lmac_0639 | Coenzyme F420-reducing hydrogenase, alpha subunit. | Hydrogenase expression/formation protein HypE. | 0.719 |
| Lmac_0635 | hypF | Lmac_0635 | Lmac_0642 | Coenzyme F420-reducing hydrogenase, alpha subunit. | Hydrogenase maturation protein HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. | 0.753 |
| Lmac_0635 | vhtD | Lmac_0635 | Lmac_0634 | Coenzyme F420-reducing hydrogenase, alpha subunit. | Hydrogenase expression/formation protein. | 0.962 |
| Lmac_0636 | Lmac_0635 | Lmac_0636 | Lmac_0635 | Sulfhydrogenase subunit delta. | Coenzyme F420-reducing hydrogenase, alpha subunit. | 0.998 |
| Lmac_0636 | hypA | Lmac_0636 | Lmac_0644 | Sulfhydrogenase subunit delta. | Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | 0.547 |
| Lmac_0636 | hypB | Lmac_0636 | Lmac_0643 | Sulfhydrogenase subunit delta. | Hydrogenase nickel incorporation protein HypB. | 0.583 |
| Lmac_0636 | hypC | Lmac_0636 | Lmac_0641 | Sulfhydrogenase subunit delta. | Hydrogenase expression/formation protein HypC. | 0.547 |
| Lmac_0636 | hypD | Lmac_0636 | Lmac_0640 | Sulfhydrogenase subunit delta. | Hydrogenase expression/formation protein HypD; Belongs to the HypD family. | 0.642 |
| Lmac_0636 | hypE | Lmac_0636 | Lmac_0639 | Sulfhydrogenase subunit delta. | Hydrogenase expression/formation protein HypE. | 0.652 |
| Lmac_0636 | hypF | Lmac_0636 | Lmac_0642 | Sulfhydrogenase subunit delta. | Hydrogenase maturation protein HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. | 0.682 |
| Lmac_0636 | vhtD | Lmac_0636 | Lmac_0634 | Sulfhydrogenase subunit delta. | Hydrogenase expression/formation protein. | 0.984 |
| Lmac_0653 | hypF | Lmac_0653 | Lmac_0642 | Acetyltransferase Pat. | Hydrogenase maturation protein HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. | 0.651 |
| hypA | Lmac_0635 | Lmac_0644 | Lmac_0635 | Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | Coenzyme F420-reducing hydrogenase, alpha subunit. | 0.550 |
| hypA | Lmac_0636 | Lmac_0644 | Lmac_0636 | Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. | Sulfhydrogenase subunit delta. | 0.547 |
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