STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_0700Cytokinin oxidase. (464 aa)    
Predicted Functional Partners:
Lmac_0701
Hypothetical protein.
 
   
 0.925
Lmac_1043
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion.
    
 0.807
Lmac_0585
Phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase; Belongs to the UbiA prenyltransferase family.
 
  
 0.710
coxB
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
 0.704
Lmac_2148
Polyketide synthase module.
  
 0.704
etfA
Electron transfer flavoprotein subunit alpha.
 
 
 0.703
etfB
Electron transfer flavoprotein beta-subunit (Beta-ETF).
 
 
 0.697
Lmac_3163
FMN-dependent dehydrogenase.
  
 0.679
korA
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
 0.670
Lmac_0586
LphB.
  
     0.653
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.