Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lmac_0586 | Lmac_0700 | Lmac_0586 | Lmac_0700 | LphB. | Cytokinin oxidase. | 0.653 |
Lmac_0586 | Lmac_0701 | Lmac_0586 | Lmac_0701 | LphB. | Hypothetical protein. | 0.768 |
Lmac_0586 | Lmac_1053 | Lmac_0586 | Lmac_1053 | LphB. | Hypothetical protein. | 0.759 |
Lmac_0586 | Lmac_1255 | Lmac_0586 | Lmac_1255 | LphB. | Ankyrin repeats (3 copies). | 0.765 |
Lmac_0586 | Lmac_1506 | Lmac_0586 | Lmac_1506 | LphB. | Hypothetical protein. | 0.768 |
Lmac_0586 | Lmac_1939 | Lmac_0586 | Lmac_1939 | LphB. | Acid sphingomyelinase-like phosphodiesterase. | 0.713 |
Lmac_0586 | Lmac_2367 | Lmac_0586 | Lmac_2367 | LphB. | Coiled-coil protein. | 0.763 |
Lmac_0586 | iraA | Lmac_0586 | Lmac_0678 | LphB. | Small-molecule methyltransferase IraA. | 0.766 |
Lmac_0700 | Lmac_0586 | Lmac_0700 | Lmac_0586 | Cytokinin oxidase. | LphB. | 0.653 |
Lmac_0700 | Lmac_0701 | Lmac_0700 | Lmac_0701 | Cytokinin oxidase. | Hypothetical protein. | 0.925 |
Lmac_0700 | Lmac_1053 | Lmac_0700 | Lmac_1053 | Cytokinin oxidase. | Hypothetical protein. | 0.545 |
Lmac_0700 | Lmac_1255 | Lmac_0700 | Lmac_1255 | Cytokinin oxidase. | Ankyrin repeats (3 copies). | 0.543 |
Lmac_0700 | Lmac_1506 | Lmac_0700 | Lmac_1506 | Cytokinin oxidase. | Hypothetical protein. | 0.569 |
Lmac_0700 | Lmac_1939 | Lmac_0700 | Lmac_1939 | Cytokinin oxidase. | Acid sphingomyelinase-like phosphodiesterase. | 0.463 |
Lmac_0700 | Lmac_2367 | Lmac_0700 | Lmac_2367 | Cytokinin oxidase. | Coiled-coil protein. | 0.607 |
Lmac_0700 | iraA | Lmac_0700 | Lmac_0678 | Cytokinin oxidase. | Small-molecule methyltransferase IraA. | 0.576 |
Lmac_0701 | Lmac_0586 | Lmac_0701 | Lmac_0586 | Hypothetical protein. | LphB. | 0.768 |
Lmac_0701 | Lmac_0700 | Lmac_0701 | Lmac_0700 | Hypothetical protein. | Cytokinin oxidase. | 0.925 |
Lmac_0701 | Lmac_1053 | Lmac_0701 | Lmac_1053 | Hypothetical protein. | Hypothetical protein. | 0.756 |
Lmac_0701 | Lmac_1255 | Lmac_0701 | Lmac_1255 | Hypothetical protein. | Ankyrin repeats (3 copies). | 0.747 |
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