Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Lmac_0702Kynurenine 3-monooxygenase. (449 aa)    
Predicted Functional Partners:
Lmac_0701
Hypothetical protein.
 
 
  0.735
Lmac_2148
Polyketide synthase module.
  
 0.718
Lmac_0700
Cytokinin oxidase.
       0.651
Lmac_0703
Regulatory protein (GGDEF and EAL domains).
       0.600
petC_2
Cytochrome b6-f complex iron-sulfur subunit.
   
 
 0.572
Lmac_1812
Peptide synthetase, non-ribosomal.
   
 0.541
pksJ
Polyketide synthase, type I.
  
 0.527
ubiB
Ubiquinone biosynthesis AarF; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis.
    
 0.452
Lmac_0673
Lipopolysaccharide biosynthesis protein.
  
     0.447
coq7
Ubiquinone biosynthesis protein; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.
    
 0.444
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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