STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
speAArginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. (631 aa)    
Predicted Functional Partners:
aguA
Peptidylarginine deiminase.
 
  
 0.989
Lmac_0716
Putative hydrolase.
 
  
 0.928
argH
Argininosuccinate lyase.
     
 0.875
astA
Arginine N-succinyltransferase, beta chain.
     
  0.858
mvaB
hydroxymethylglutaryl-CoA lyase.
       0.688
Lmac_0718
Acyl CoA carboxylase subunit alpha.
       0.616
Lmac_2648
FAD dependent oxidoreductase.
     
  0.589
aatA
Aspartate aminotransferase A.
    
  0.573
Lmac_2727
Aspartate aminotransferase.
    
  0.573
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
       0.539
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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