STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lspDType II protein secretion LspD. (813 aa)    
Predicted Functional Partners:
Lmac_0093
General secretion pathway protein C.
  
 
 0.977
lspE
Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
  
 0.967
lspJ
Type II secretory pathway protein LspJ.
 
  
 0.927
lspG
Type II secretory pathway protein LspG.
  
 0.888
lspK
Type II secretory pathway protein.
 
   
 0.871
lspF
Type II secretory pathway protein LspF.
 
  
 0.858
lspI
Type II secretory pathway protein LspI.
 
  
 0.845
Lmac_0461
General secretion pathway protein LspH.
 
  
 0.789
pilQ
Type IV pilus (Tfp) assembly protein PilQ.
 
  
0.737
Lmac_1631
General secretion pathway protein; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
  
 0.724
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.