STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lspDType II protein secretion LspD. (813 aa)    
Predicted Functional Partners:
lspE
Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.989
lspG
Type II secretory pathway protein LspG.
 
 
 0.954
lspJ
Type II secretory pathway protein LspJ.
 
  
 0.947
lspK
Type II secretory pathway protein.
 
   
 0.909
lspF
Type II secretory pathway protein LspF.
 
  
 0.906
lspI
Type II secretory pathway protein LspI.
 
 
 0.906
Lmac_0461
General secretion pathway protein LspH.
 
 
 0.883
Lmac_0093
General secretion pathway protein C.
  
 
 0.877
Lmac_1618
Flagellar biosynthetic protein FlhB.
  
 
 0.849
pilQ
Type IV pilus (Tfp) assembly protein PilQ.
 
  
0.767
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.