Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lmac_0280 | Lmac_0758 | Lmac_0280 | Lmac_0758 | Transporting ATPase. | Cupin. | 0.523 |
| Lmac_0280 | mnmC | Lmac_0280 | Lmac_0961 | Transporting ATPase. | FAD dependent oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | 0.402 |
| Lmac_0757 | Lmac_0758 | Lmac_0757 | Lmac_0758 | Polysaccharide deacetylase. | Cupin. | 0.505 |
| Lmac_0757 | cpdA | Lmac_0757 | Lmac_0756 | Polysaccharide deacetylase. | 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA. | 0.628 |
| Lmac_0758 | Lmac_0280 | Lmac_0758 | Lmac_0280 | Cupin. | Transporting ATPase. | 0.523 |
| Lmac_0758 | Lmac_0757 | Lmac_0758 | Lmac_0757 | Cupin. | Polysaccharide deacetylase. | 0.505 |
| Lmac_0758 | Lmac_1342 | Lmac_0758 | Lmac_1342 | Cupin. | 2OG-Fe(II) oxygenase. | 0.518 |
| Lmac_0758 | Lmac_2934 | Lmac_0758 | Lmac_2934 | Cupin. | Alpha helix protein; Belongs to the UPF0307 family. | 0.541 |
| Lmac_0758 | cpdA | Lmac_0758 | Lmac_0756 | Cupin. | 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA. | 0.412 |
| Lmac_0758 | mnmC | Lmac_0758 | Lmac_0961 | Cupin. | FAD dependent oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | 0.608 |
| Lmac_0758 | rplP | Lmac_0758 | Lmac_1221 | Cupin. | 50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.949 |
| Lmac_1342 | Lmac_0758 | Lmac_1342 | Lmac_0758 | 2OG-Fe(II) oxygenase. | Cupin. | 0.518 |
| Lmac_1342 | mnmC | Lmac_1342 | Lmac_0961 | 2OG-Fe(II) oxygenase. | FAD dependent oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | 0.424 |
| Lmac_2934 | Lmac_0758 | Lmac_2934 | Lmac_0758 | Alpha helix protein; Belongs to the UPF0307 family. | Cupin. | 0.541 |
| Lmac_2934 | rplP | Lmac_2934 | Lmac_1221 | Alpha helix protein; Belongs to the UPF0307 family. | 50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.652 |
| cpdA | Lmac_0757 | Lmac_0756 | Lmac_0757 | 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA. | Polysaccharide deacetylase. | 0.628 |
| cpdA | Lmac_0758 | Lmac_0756 | Lmac_0758 | 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA. | Cupin. | 0.412 |
| mnmC | Lmac_0280 | Lmac_0961 | Lmac_0280 | FAD dependent oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | Transporting ATPase. | 0.402 |
| mnmC | Lmac_0758 | Lmac_0961 | Lmac_0758 | FAD dependent oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | Cupin. | 0.608 |
| mnmC | Lmac_1342 | Lmac_0961 | Lmac_1342 | FAD dependent oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family. | 2OG-Fe(II) oxygenase. | 0.424 |
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