STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tdcBL-threonine dehydratase catabolic TdcB. (327 aa)    
Predicted Functional Partners:
budB
Acetolactate synthase; Belongs to the TPP enzyme family.
 
 0.893
dlpA_1
DlpA protein (isocitrate and isopropylmalate dehydrogenase family protein).
 
 
 0.816
ala_1
D-alanine-aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.810
korA
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.801
metB
Cystathionine beta-lyase.
 
 
 0.798
trpB
Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
  
 0.773
Lmac_1043
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion.
     
 0.766
cysK
Cystathionine beta synthase.
 
  
0.755
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
 0.752
trpC
Indole-3-glycerol phosphate synthase; Belongs to the TrpC family.
    
 0.747
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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