STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_0925Outer membrane efflux lipoprotein. (492 aa)    
Predicted Functional Partners:
emrA_2
Multidrug efflux system.
 
 0.981
emrB
Multidrug efflux system protein; Belongs to the major facilitator superfamily.
 
 
 0.950
emrA_1
Multidrug efflux system.
 
 0.844
mdtA
Multidrug efflux system, subunit A; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.791
Lmac_3092
Outer membrane efflux protein.
  
  
 
0.777
Lmac_0014
Outer membrane efflux lipoprotein.
  
  
 
0.769
Lmac_1125
Outer membrane efflux protein.
  
  
 
0.761
Lmac_0213
RND multidrug efflux membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.726
Lmac_0408
Outer membrane protein TolC.
     
 0.703
lmxF
Multidrug efflux pump.
 
  0.669
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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