STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
emrA_2Multidrug efflux system. (411 aa)    
Predicted Functional Partners:
emrB
Multidrug efflux system protein; Belongs to the major facilitator superfamily.
 
 
 0.980
Lmac_0925
Outer membrane efflux lipoprotein.
 
 0.971
Lmac_0014
Outer membrane efflux lipoprotein.
  
 0.836
Lmac_0016
Multidrug resistance protein, MFS superfamily.
 
   0.812
Lmac_1125
Outer membrane efflux protein.
  
 0.764
Lmac_3092
Outer membrane efflux protein.
  
 0.759
Lmac_0408
Outer membrane protein TolC.
 
 0.726
Lmac_0089
Outer membrane efflux protein.
  
 0.716
Lmac_0193
Outer membrane efflux protein.
  
 0.698
Lmac_0212
Outer membrane efflux protein.
  
 0.694
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.