STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_1190enoyl-CoA hydratase. (258 aa)    
Predicted Functional Partners:
mvaB
hydroxymethylglutaryl-CoA lyase.
 
 0.994
Lmac_1189
Acetyl/propionyl-CoA carboxylase, beta subunit.
 
 
 0.990
Lmac_0718
Acyl CoA carboxylase subunit alpha.
 0.958
Lmac_0823
Sensory box sensor histidine kinase/response regulator.
    
 0.914
Lmac_1280
Sensory histidine-kinase / response regulator.
    
 0.914
Lmac_1292
Sensory box histidine kinase/response regulator.
    
 0.914
Lmac_1811
Sensory box sensor histidine kinase/response regulator.
    
 0.914
Lmac_1813
Sensory histidine-kinase / response regulator.
    
 0.914
Lmac_2788
Sensory histidine-kinase / response regulator.
    
 0.914
Lmac_1460
Acyl CoA dehydrogenase.
 
 0.902
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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