STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yggR_1Transporter. (244 aa)    
Predicted Functional Partners:
Lmac_1521
Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
   
 0.791
pilC
Pilus assembly protein PilC.
 
   
 0.784
lspF
Type II secretory pathway protein LspF.
 
   
 0.779
Lmac_1210
Hypothetical protein.
       0.634
pilM
Tfp pilus assembly protein, ATPase PilM.
 
   
 0.607
pilQ
Type IV pilus (Tfp) assembly protein PilQ.
 
   
 0.510
Lmac_0900
DNA uptake/competence protein ComA.
     
 0.448
Lmac_1209
Hypothetical protein.
       0.412
Lmac_0117
GGDEF domain-containing sensory box protein.
     
 0.407
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.