STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yajRTransporter, major facilitator family. (428 aa)    
Predicted Functional Partners:
pksJ
Polyketide synthase, type I.
    
 0.619
pheA
Prephenate dehydratase.
   
 
 0.615
Lmac_2148
Polyketide synthase module.
    
 0.544
Lmac_1243
3-oxoacyl-ACP reductase.
       0.526
Lmac_2655
2-acylglycerophosphoethanolamine acyltransferase.
     
 0.513
Lmac_1241
Single strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
       0.500
Lmac_0526
Transporter of the major facilitator superfamily (MFS).
  
    0.451
Lmac_1110
Succinate dehydrogenase cytochrome b556 subunit C.
  
  
  0.445
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.