STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_1299Trans-aconitate 2-methyltransferase. (242 aa)    
Predicted Functional Partners:
Lmac_2148
Polyketide synthase module.
  
 0.653
aaeB
P-hydroxybenzoic acid efflux pump subunit AaeB.
  
     0.640
Lmac_1879
Transporter family transporter protein.
  
     0.618
petC_2
Cytochrome b6-f complex iron-sulfur subunit.
  
 0.576
pksJ
Polyketide synthase, type I.
  
 0.565
Lmac_1753
Clostripain family protein.
  
     0.553
coq7
Ubiquinone biosynthesis protein; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.
   
 0.541
Lmac_2777
HEAT repeat protein.
  
     0.534
Lmac_1300
Hypothetical protein.
       0.524
Lmac_1768
HEAT repeat protein.
  
     0.514
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.