STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yqiXAmino acid ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family. (250 aa)    
Predicted Functional Partners:
Lmac_1332
ABC transporter ATP-binding protein.
 
 0.997
yecS
Transporter subunit: permease component of ABC superfamily transporter.
 0.997
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
    0.874
argH
Argininosuccinate lyase.
  
    0.866
carA
Carbamoyl phosphate synthase, small subunit; Belongs to the CarA family.
  
  
 0.808
carB_1
Carbamoyl-phosphate synthase large subunit; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
  
  
 0.806
argR
Arginine repressor ArgR; Regulates arginine biosynthesis genes.
 
     0.680
Lmac_2436
PAS fold protein.
    
 0.679
Lmac_0823
Sensory box sensor histidine kinase/response regulator.
    
 0.647
Lmac_1280
Sensory histidine-kinase / response regulator.
    
 0.647
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.