STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yqiXAmino acid ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family. (250 aa)    
Predicted Functional Partners:
yecS
Transporter subunit: permease component of ABC superfamily transporter.
 0.997
Lmac_1332
ABC transporter ATP-binding protein.
 
 0.996
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
    0.834
argH
Argininosuccinate lyase.
  
  
 0.816
carB_1
Carbamoyl-phosphate synthase large subunit; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
  
  
 0.811
Lmac_0117
GGDEF domain-containing sensory box protein.
    
 0.787
carA
Carbamoyl phosphate synthase, small subunit; Belongs to the CarA family.
  
    0.786
Lmac_2436
PAS fold protein.
    
 0.726
Lmac_0856
Sensory box histidine kinase/response regulator.
   
 0.724
Lmac_0823
Sensory box sensor histidine kinase/response regulator.
   
 0.721
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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