Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_1367Transferase. (181 aa)    
Predicted Functional Partners:
gor
Glutathione reductase.
       0.872
Lmac_0406
Sulfate transporter.
   
 0.846
cbbL
Ribulose bisphosphate carboxylase large chain; Belongs to the RuBisCO large chain family.
    
 
 0.834
Lmac_0609
Carbonic anhydrase Mig5.
    
 0.808
Lmac_0888
Carbonic anhydrase.
    
 0.808
Lmac_1371
ABC transporter permease.
       0.695
pksJ
Polyketide synthase, type I.
  
  
 0.694
Lmac_1369
Hemolysin D.
       0.601
Lmac_1370
ABC transporter ATP-binding protein.
       0.586
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
    0.469
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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