STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbbLRibulose bisphosphate carboxylase large chain; Belongs to the RuBisCO large chain family. (377 aa)    
Predicted Functional Partners:
Lmac_1367
Transferase.
    
 
 0.922
fucA
L-fuculose phosphate aldolase.
  
 
 0.850
Lmac_1060
HAD-superfamily hydrolase.
    
 0.699
pgk
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 0.672
Lmac_2439
Beta-phosphoglucomutase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
    
  0.656
Lmac_1377
MobA-like NTP transferase domain protein.
 
     0.651
Lmac_2607
Phosphatase.
     
 0.649
Lmac_0406
Sulfate transporter.
    
 
 0.540
trxA
Thioredoxin; Belongs to the thioredoxin family.
  
 
 
 0.489
mtnA
Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).
  
  
 0.479
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.