STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ala_1D-alanine-aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (307 aa)    
Predicted Functional Partners:
Lmac_1923
4-hydroxy-2-oxovalerate aldolase.
  
 0.952
mvaB
hydroxymethylglutaryl-CoA lyase.
  
 0.828
odpB
Pyruvate dehydrogenase E1 subunit beta.
   
 0.828
pheA
Prephenate dehydratase.
 
  
 0.826
pksJ
Polyketide synthase, type I.
  
 0.826
trpE
Anthranilate synthase.
  
 
 0.815
Lmac_2148
Polyketide synthase module.
  
 0.811
tdcB
L-threonine dehydratase catabolic TdcB.
  
 
 0.810
Lmac_1043
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion.
  
 0.797
Lmac_1279
Peptide synthetase, non-ribosomal.
   
 0.732
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.