STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_1423Transporter of the major facilitator superfamily (MFS). (407 aa)    
Predicted Functional Partners:
pksJ
Polyketide synthase, type I.
    
 0.619
pheA
Prephenate dehydratase.
   
 
 0.615
Lmac_2148
Polyketide synthase module.
    
 0.544
Lmac_2655
2-acylglycerophosphoethanolamine acyltransferase.
     
 0.513
umuD
SOS error prone mutagenesis protein UmuD (RumA); Belongs to the peptidase S24 family.
       0.483
umuC
DNA polymerase V, subunit C.
       0.483
Lmac_1569
Integral membrane protein.
  
     0.479
Lmac_1422
Hypothetical protein.
       0.473
Lmac_1753
Clostripain family protein.
  
     0.462
Lmac_0161
Methoxymalonyl CoA synthase.
  
     0.429
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.