STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilBPilus assembly protein PilB. (568 aa)    
Predicted Functional Partners:
pilC
Pilus assembly protein PilC.
 
 
 0.994
Lmac_1521
Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
 
 0.974
lspF
Type II secretory pathway protein LspF.
 
 
 0.972
Lmac_1632
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
 
 0.930
pilN
Tfp pilus assembly protein PilN.
   
 
 0.825
lspG
Type II secretory pathway protein LspG.
 
 0.813
yggR_2
Transporter.
 
  
 0.761
pilQ
Type IV pilus (Tfp) assembly protein PilQ.
 
 
 
 0.741
lspI
Type II secretory pathway protein LspI.
  
 0.724
Lmac_0461
General secretion pathway protein LspH.
  
 0.721
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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