STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_1625Putative transmembrane protein. (305 aa)    
Predicted Functional Partners:
Lmac_1626
Hypothetical protein.
 
     0.946
Lmac_1624
ABC transporter permease.
  
 0.937
ttg2A
Toluene tolerance ABC transporter ATP binding protein Ttg2A.
  
 0.844
Lmac_1969
ABC transporter ATP binding protein.
  
 0.844
ttg2B
Toluene tolerance protein Ttg2B.
  
 0.746
Lmac_1970
ABC transporter permease.
  
 0.746
ttg2D
Toluene tolerance protein Ttg2D.
 
 0.730
Lmac_1432
Outer membrane protein.
  
     0.635
Lmac_1427
Cardiolipin synthetase.
  
     0.622
Lmac_2499
Hypothetical protein.
  
     0.607
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.