STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_1638DNA binding stress protein; Belongs to the Dps family. (145 aa)    
Predicted Functional Partners:
clpS
Regulatory protein for ClpA substrate specificity; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
   
 
 0.938
yhbH
Ribosome-associated, sigma 54 modulation protein.
   
    0.699
Lmac_0650
OsmC-like protein.
  
  
 0.609
Lmac_0119
Alkylhydroperoxide reductase, AhpC/TSA family.
  
  
 0.582
ahpC
Alkyl hydroperoxide reductase.
  
  
 0.582
Lmac_0134
Serine protein kinase.
   
    0.545
Lmac_1637
Hypothetical protein.
       0.534
Lmac_1002
Trp repressor binding protein; Belongs to the WrbA family.
   
  
 0.527
wrbA
Flavoprotein WrbA (Trp repressor binding protein).
   
  
 0.527
sodB
Superoxide dismutase, iron; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
 
  
 0.519
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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