STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_1667TPR repeat-containing protein. (301 aa)    
Predicted Functional Partners:
Lmac_0768
Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
    
  0.676
Lmac_1668
Helicase, DEAD/DEAH box family.
       0.517
Lmac_0094
Sel-1 protein.
  
     0.421
Lmac_1881
Protein with TPR motifs (protein-protein interaction motif).
  
 
 0.418
Lmac_1293
Sensory histidine-kinase / response regulator.
    
 0.412
Lmac_1428
Sensory histidine-kinase / response regulator.
    
 0.412
Lmac_1815
Sensory histidine-kinase / response regulator.
    
 0.412
Lmac_2710
Sensory histidine-kinase / response regulator.
    
 0.412
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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