STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_1683Hypothetical protein; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain. (727 aa)    
Predicted Functional Partners:
Lmac_1684
Multidrug resistance efflux pump PmrA.
 
 0.990
Lmac_1682
ABC transporter.
 
    
0.856
Lmac_1685
Cyclic nucleotide-binding protein.
 
     0.822
Lmac_0408
Outer membrane protein TolC.
  
 
 0.646
msbA
ABC transporter, ATP binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
  
 
 
0.621
Lmac_2246
Multidrug resistance ABC transporter ATP binding protein.
  
 
 
0.608
mdlB
Multidrug ABC transporter ATPase/permease.
  
 
 
0.596
Lmac_2254
Multidrug resistance ABC transporter ATP binding protein.
  
 
 
0.591
Lmac_2420
RND efflux membrane fusion protein.
  
  0.589
abcT
ABC transporter ATP-binding protein.
  
 
 
0.589
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.