STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_1684Multidrug resistance efflux pump PmrA. (425 aa)    
Predicted Functional Partners:
Lmac_1682
ABC transporter.
 
 0.990
Lmac_1683
Hypothetical protein; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 
 0.990
Lmac_2421
Toxin secretion ABC transporter HlyB/MsbA family transporter ATP-binding protein.
 
 0.857
Lmac_0408
Outer membrane protein TolC.
  
 0.845
Lmac_1685
Cyclic nucleotide-binding protein.
       0.798
Lmac_2906
DNA-binding transcriptional dual regulator Crp.
 
     0.658
Lmac_3025
Hypothetical protein.
  
     0.626
rhsA
Putative deoxyribonuclease RhsA.
  
     0.621
Lmac_1612
Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
  
    0.611
Lmac_2499
Hypothetical protein.
  
     0.602
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.