STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_1684Multidrug resistance efflux pump PmrA. (425 aa)    
Predicted Functional Partners:
Lmac_1682
ABC transporter.
 
 0.994
Lmac_1683
Hypothetical protein; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 
 0.991
Lmac_1685
Cyclic nucleotide-binding protein.
    
  0.874
Lmac_2421
Toxin secretion ABC transporter HlyB/MsbA family transporter ATP-binding protein.
 
 0.871
Lmac_0408
Outer membrane protein TolC.
  
 0.706
Lmac_2906
DNA-binding transcriptional dual regulator Crp.
 
  
  0.664
Lmac_3025
Hypothetical protein.
  
     0.626
Lmac_3165
Hypothetical protein.
  
  
  0.626
rhsA
Putative deoxyribonuclease RhsA.
  
     0.621
Lmac_2556
Putative esterase with patatin domain protein.
  
 
  0.620
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.