Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lmac_0048 | Lmac_1763 | Lmac_0048 | Lmac_1763 | Hypothetical protein. | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.746 |
Lmac_1763 | Lmac_0048 | Lmac_1763 | Lmac_0048 | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | Hypothetical protein. | 0.746 |
Lmac_1763 | Lmac_1764 | Lmac_1763 | Lmac_1764 | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | Putative toxin antitoxin plasmid stabilization system ParE; Belongs to the RelE toxin family. | 0.875 |
Lmac_1763 | etfB | Lmac_1763 | Lmac_1765 | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | Electron transfer flavoprotein beta-subunit (Beta-ETF). | 0.400 |
Lmac_1763 | galU | Lmac_1763 | Lmac_1762 | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | Glucose-1-phosphate uridylyltransferase. | 0.446 |
Lmac_1763 | ugd | Lmac_1763 | Lmac_1761 | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | UDP-glucose 6-dehydrogenase. | 0.415 |
Lmac_1763 | yoeB | Lmac_1763 | Lmac_0393 | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | Toxin YoeB. | 0.930 |
Lmac_1764 | Lmac_1763 | Lmac_1764 | Lmac_1763 | Putative toxin antitoxin plasmid stabilization system ParE; Belongs to the RelE toxin family. | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.875 |
Lmac_1764 | etfB | Lmac_1764 | Lmac_1765 | Putative toxin antitoxin plasmid stabilization system ParE; Belongs to the RelE toxin family. | Electron transfer flavoprotein beta-subunit (Beta-ETF). | 0.400 |
Lmac_1764 | galU | Lmac_1764 | Lmac_1762 | Putative toxin antitoxin plasmid stabilization system ParE; Belongs to the RelE toxin family. | Glucose-1-phosphate uridylyltransferase. | 0.446 |
Lmac_1764 | ugd | Lmac_1764 | Lmac_1761 | Putative toxin antitoxin plasmid stabilization system ParE; Belongs to the RelE toxin family. | UDP-glucose 6-dehydrogenase. | 0.415 |
etfB | Lmac_1763 | Lmac_1765 | Lmac_1763 | Electron transfer flavoprotein beta-subunit (Beta-ETF). | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.400 |
etfB | Lmac_1764 | Lmac_1765 | Lmac_1764 | Electron transfer flavoprotein beta-subunit (Beta-ETF). | Putative toxin antitoxin plasmid stabilization system ParE; Belongs to the RelE toxin family. | 0.400 |
galU | Lmac_1763 | Lmac_1762 | Lmac_1763 | Glucose-1-phosphate uridylyltransferase. | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.446 |
galU | Lmac_1764 | Lmac_1762 | Lmac_1764 | Glucose-1-phosphate uridylyltransferase. | Putative toxin antitoxin plasmid stabilization system ParE; Belongs to the RelE toxin family. | 0.446 |
galU | ugd | Lmac_1762 | Lmac_1761 | Glucose-1-phosphate uridylyltransferase. | UDP-glucose 6-dehydrogenase. | 0.969 |
ugd | Lmac_1763 | Lmac_1761 | Lmac_1763 | UDP-glucose 6-dehydrogenase. | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.415 |
ugd | Lmac_1764 | Lmac_1761 | Lmac_1764 | UDP-glucose 6-dehydrogenase. | Putative toxin antitoxin plasmid stabilization system ParE; Belongs to the RelE toxin family. | 0.415 |
ugd | galU | Lmac_1761 | Lmac_1762 | UDP-glucose 6-dehydrogenase. | Glucose-1-phosphate uridylyltransferase. | 0.969 |
yoeB | Lmac_1763 | Lmac_0393 | Lmac_1763 | Toxin YoeB. | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.930 |