STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lly4-hydroxyphenylpyruvate dioxygenase. (353 aa)    
Predicted Functional Partners:
hmgA
Homogentisate 1,2-dioxygenase.
 
 0.996
Lmac_1829
Glutathione S-transferase (maleylacetoacetate isomerase).
 
  
 0.968
Lmac_1828
Fumarylacetoacetate hydrolase.
 
  
 0.960
Lmac_0390
Phenylalanine-4-hydroxylase.
 
  
 0.914
Lmac_1825
Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
 
  
 0.849
Lmac_0718
Acyl CoA carboxylase subunit alpha.
  
 
 0.808
pksJ
Polyketide synthase, type I.
    
 0.801
Lmac_1430
Non-ribosomal peptide synthetase/polyketide synthetase.
    
 0.799
Lmac_1201
Pterin-4-alpha-carbinolamine dehydratase.
  
  
 0.789
Lmac_2147
Acetyltransferase.
    
 0.788
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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