STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_1850ATP-dependent DNA helicase. (502 aa)    
Predicted Functional Partners:
Lmac_1851
Phage related integrase; Belongs to the 'phage' integrase family.
       0.741
Lmac_2260
Hypothetical protein.
  
     0.663
Lmac_1852
Phage related integrase.
       0.655
Lmac_3126
ATPase.
  
     0.534
Lmac_2763
Protein of unknown function DUF1016.
 
     0.533
Lmac_2259
Antitoxin HipB.
  
     0.526
Lmac_1033
ATP-dependent DNA helicase.
  
  
 
0.513
Lmac_2247
Putative secreted esterase.
  
     0.439
Lmac_2273
Putative conjugative transfer protein TraI.
  
     0.427
Lmac_0046
Hypothetical protein.
 
     0.426
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.