STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_1851Phage related integrase; Belongs to the 'phage' integrase family. (313 aa)    
Predicted Functional Partners:
Lmac_1852
Phage related integrase.
     0.979
Lmac_1031
Phage-related integrase; Belongs to the 'phage' integrase family.
  
     0.750
Lmac_1850
ATP-dependent DNA helicase.
       0.741
Lmac_0960
Phosphate acetyl/butaryl transferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.685
Lmac_2103
Conjugative coupling factor TraD.
  
     0.605
Lmac_2793
Conjugative coupling factor TraD.
  
     0.605
Lmac_0487
Ankyrin repeat family transporter protein.
  
     0.581
Lmac_2273
Putative conjugative transfer protein TraI.
  
     0.541
Lmac_1198
Hypothetical protein.
  
 
   0.530
Lmac_2320
Aminoglycoside 6'-N-acetyltransferase.
  
     0.523
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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