STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_1922UDP-N-acetylmuramyl tripeptide synthase. (347 aa)    
Predicted Functional Partners:
Lmac_2148
Polyketide synthase module.
  
 
 0.770
pksJ
Polyketide synthase, type I.
     
 0.766
Lmac_1923
4-hydroxy-2-oxovalerate aldolase.
     
 0.697
Lmac_2756
Non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
     
 0.696
Lmac_2147
Acetyltransferase.
     
 0.690
Lmac_1279
Peptide synthetase, non-ribosomal.
   
 
 0.686
Lmac_2711
Polyketide synthase module.
   
 
 0.660
Lmac_0656
Peptide synthetase, non-ribosomal.
     
 0.659
Lmac_1430
Non-ribosomal peptide synthetase/polyketide synthetase.
     
 0.659
ftsQ
Cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly.
  
  
 0.567
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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