STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_19234-hydroxy-2-oxovalerate aldolase. (299 aa)    
Predicted Functional Partners:
dlpA_1
DlpA protein (isocitrate and isopropylmalate dehydrogenase family protein).
 
 0.966
ala_1
D-alanine-aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 0.952
Lmac_0718
Acyl CoA carboxylase subunit alpha.
  
 
 0.834
pksJ
Polyketide synthase, type I.
  
 
 0.822
yfcX
Enoyl CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.817
fadB
3-hydroxyacyl CoA dehydrogenase oxidoreductase protein.
  
 
 0.817
Lmac_2147
Acetyltransferase.
  
 
 0.813
Lmac_2148
Polyketide synthase module.
  
 
 0.791
korA
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
 0.789
Lmac_1043
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion.
   
 0.784
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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