STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dlpA_1DlpA protein (isocitrate and isopropylmalate dehydrogenase family protein). (369 aa)    
Predicted Functional Partners:
Lmac_1923
4-hydroxy-2-oxovalerate aldolase.
 
 0.966
icd
Isocitrate dehydrogenase.
 
0.939
mvaB
hydroxymethylglutaryl-CoA lyase.
  
 0.892
dlpA_2
DlpA protein (isocitrate and isopropylmalate dehydrogenase family protein).
      0.853
pheA
Prephenate dehydratase.
 
 
 0.836
tdcB
L-threonine dehydratase catabolic TdcB.
 
 
 0.816
Lmac_1924
Hypothetical protein.
       0.798
sdhA_2
Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 0.793
fadH
2,4-dienoyl-CoA reductase FadH1.
  
 
 0.782
Lmac_1552
Aconitate hydratase.
 0.769
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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