STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_1970ABC transporter permease. (376 aa)    
Predicted Functional Partners:
Lmac_1969
ABC transporter ATP binding protein.
 
 0.998
yrbD
Toluene transporter subunit: membrane component of ABC superfamily protein.
 
 0.989
ttg2A
Toluene tolerance ABC transporter ATP binding protein Ttg2A.
 
 0.988
Lmac_1968
ABC transport system periplasmic substrate binding protein.
 
 0.988
Lmac_1967
Transport protein.
 
 
  0.814
ttg2B
Toluene tolerance protein Ttg2B.
  
  
 
0.809
Lmac_0581
Putative anti-sigma-B factor antagonist (Anti-anti-sigma-B factor).
  
 0.765
Lmac_1625
Putative transmembrane protein.
  
 0.746
ttg2D
Toluene tolerance protein Ttg2D.
 
 
 0.742
pal
Peptidoglycan-associated lipoprotein precursor (19 kDa surface antigen) (PPL); Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
  
  0.621
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.