Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lmac_0700 | Lmac_1043 | Lmac_0700 | Lmac_1043 | Cytokinin oxidase. | 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion. | 0.807 |
| Lmac_0700 | fni | Lmac_0700 | Lmac_1971 | Cytokinin oxidase. | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.633 |
| Lmac_0700 | korA | Lmac_0700 | Lmac_2458 | Cytokinin oxidase. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.670 |
| Lmac_1043 | Lmac_0700 | Lmac_1043 | Lmac_0700 | 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion. | Cytokinin oxidase. | 0.807 |
| Lmac_1043 | fni | Lmac_1043 | Lmac_1971 | 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion. | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.652 |
| Lmac_1043 | korA | Lmac_1043 | Lmac_2458 | 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.781 |
| Lmac_1962 | Lmac_1963 | Lmac_1962 | Lmac_1963 | Putative mevalonate kinase. | Mevalonate diphosphate decarboxylase. | 0.993 |
| Lmac_1962 | fni | Lmac_1962 | Lmac_1971 | Putative mevalonate kinase. | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.876 |
| Lmac_1962 | mvaA | Lmac_1962 | Lmac_1972 | Putative mevalonate kinase. | Hydroxymethylglutaryl CoA reductase; Belongs to the HMG-CoA reductase family. | 0.945 |
| Lmac_1963 | Lmac_1962 | Lmac_1963 | Lmac_1962 | Mevalonate diphosphate decarboxylase. | Putative mevalonate kinase. | 0.993 |
| Lmac_1963 | Lmac_1973 | Lmac_1963 | Lmac_1973 | Mevalonate diphosphate decarboxylase. | Hypothetical protein. | 0.907 |
| Lmac_1963 | fni | Lmac_1963 | Lmac_1971 | Mevalonate diphosphate decarboxylase. | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.913 |
| Lmac_1963 | ispA | Lmac_1963 | Lmac_0027 | Mevalonate diphosphate decarboxylase. | Geranyltranstransferase; Belongs to the FPP/GGPP synthase family. | 0.755 |
| Lmac_1963 | ispB | Lmac_1963 | Lmac_0040 | Mevalonate diphosphate decarboxylase. | Octaprenyl diphosphate synthase IspB; Belongs to the FPP/GGPP synthase family. | 0.755 |
| Lmac_1963 | mvaA | Lmac_1963 | Lmac_1972 | Mevalonate diphosphate decarboxylase. | Hydroxymethylglutaryl CoA reductase; Belongs to the HMG-CoA reductase family. | 0.952 |
| Lmac_1973 | Lmac_1963 | Lmac_1973 | Lmac_1963 | Hypothetical protein. | Mevalonate diphosphate decarboxylase. | 0.907 |
| Lmac_1973 | fni | Lmac_1973 | Lmac_1971 | Hypothetical protein. | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.864 |
| Lmac_1973 | mvaA | Lmac_1973 | Lmac_1972 | Hypothetical protein. | Hydroxymethylglutaryl CoA reductase; Belongs to the HMG-CoA reductase family. | 0.892 |
| fni | Lmac_0700 | Lmac_1971 | Lmac_0700 | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | Cytokinin oxidase. | 0.633 |
| fni | Lmac_1043 | Lmac_1971 | Lmac_1043 | Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion. | 0.652 |
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