STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yjgBPutative alcohol dehydrogenase, Zn-dependent and NAD(P)-binding protein. (335 aa)    
Predicted Functional Partners:
adhT
Alcohol dehydrogenase.
  
  
 
0.820
yahK
Putative hydroxyacid dehydrogenase.
     
  0.745
frmA_2
Alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.631
Lmac_1991
Hypothetical protein.
       0.558
Lmac_1992
Peptide chain release factor.
       0.515
Lmac_1989
Esterase.
       0.501
Lmac_2714
D-xylose reductase III.
  
 
 0.470
Lmac_2439
Beta-phosphoglucomutase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
 0.462
yfcX
Enoyl CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
    
 0.458
fadB
3-hydroxyacyl CoA dehydrogenase oxidoreductase protein.
    
 0.458
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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