STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_2001Hypothetical protein. (414 aa)    
Predicted Functional Partners:
chiA1
Chitinase A1 precursor.
   
 0.925
egl
Endoglucanase precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.682
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.681
ugd
UDP-glucose 6-dehydrogenase.
    
  0.652
Lmac_2442
Glycosyl transferase family 2.
    
  0.606
Lmac_2852
Endonuclease/exonuclease/phosphatase family protein.
   
 
 0.602
Lmac_0050
Interaptin.
    
   0.403
Lmac_0894
Ankyrin repeats (3 copies).
    
   0.403
smc_1
Chromosome partition protein smc.
    
   0.403
Lmac_2088
Hypothetical protein.
    
   0.403
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.