STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_2183Serpin (serine protease inhibitor); Belongs to the serpin family. (416 aa)    
Predicted Functional Partners:
Lmac_3045
Cysteine protease.
    
 0.867
cueO
Multicopper oxidase.
    
  0.785
Lmac_2186
Hypothetical protein.
 
     0.658
Lmac_2184
Hypothetical protein.
       0.651
Lmac_2185
Hypothetical protein; Belongs to the UPF0276 family.
       0.651
pepN
Aminopeptidase.
    
 0.641
Lmac_0989
Hypothetical protein.
    
 0.641
pepO
Metallopeptidase PepO, peptidase, M13 family transporter.
    
 0.606
Lmac_0314
Ankyrin repeats (3 copies).
  
 
  0.525
Lmac_3048
SET domain protein.
  
  
  0.502
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.