STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_2185Hypothetical protein; Belongs to the UPF0276 family. (290 aa)    
Predicted Functional Partners:
Lmac_2184
Hypothetical protein.
 
  
 0.982
Lmac_0765
Signal peptide protein.
 
  
 0.946
Lmac_0063
Hypothetical protein.
 
  
 0.928
Lmac_0065
Silver efflux pump.
 
     0.696
Lmac_2183
Serpin (serine protease inhibitor); Belongs to the serpin family.
       0.651
Lmac_1627
Silver efflux pump.
 
     0.617
Lmac_2186
Hypothetical protein.
       0.601
Lmac_0886
TQO small subunit DoxD.
  
  
 0.548
Lmac_1753
Clostripain family protein.
   
    0.516
pacL
Cation efflux transporter.
   
    0.440
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.