STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_2227Ankyrin repeats (3 copies). (556 aa)    
Predicted Functional Partners:
Lmac_3048
SET domain protein.
  
 
  0.849
Lmac_0037
Rho GTPase (Miro-like).
  
 
  0.840
Lmac_0290
Eukaryotic huntingtin interacting protein B.
  
 
  0.825
Lmac_2173
Phosphoprotein phosphatase.
  
 
  0.799
Lmac_2148
Polyketide synthase module.
    
 0.783
Lmac_1881
Protein with TPR motifs (protein-protein interaction motif).
  
  0.774
Lmac_1639
Ankyrin repeat protein.
  
     0.772
Lmac_2059
Ankyrin repeats (3 copies).
  
     0.758
Lmac_0633
RasGEF domain protein.
  
     0.751
pksJ
Polyketide synthase, type I.
   
 0.743
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.