STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
grpB_1Glutamate rich protein GrpB. (319 aa)    
Predicted Functional Partners:
Lmac_2251
GNAT family acetyltransferase.
 
    0.918
Lmac_2249
ATPase.
 
     0.848
Lmac_2253
Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase.
 
     0.840
uup_1
ABC transporter ATP-binding protein Uup.
 
     0.826
Lmac_2250
Hypothetical protein.
 
     0.821
Lmac_2254
Multidrug resistance ABC transporter ATP binding protein.
 
     0.814
Lmac_2248
MerR family transcriptional regulator.
 
     0.766
Lmac_2983
GNAT family acetyltransferase.
 
    0.744
aph_1
Spectinomycin phosphotransferase.
  
     0.699
Lmac_2338
GNAT family acetyltransferase.
 
     0.692
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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