STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_2254Multidrug resistance ABC transporter ATP binding protein. (603 aa)    
Predicted Functional Partners:
uup_1
ABC transporter ATP-binding protein Uup.
 
 
   0.924
Lmac_2148
Polyketide synthase module.
  
 0.871
pksJ
Polyketide synthase, type I.
  
 0.870
Lmac_2251
GNAT family acetyltransferase.
 
     0.863
Lmac_2711
Polyketide synthase module.
   
 0.840
Lmac_2249
ATPase.
 
     0.837
Lmac_2253
Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase.
 
     0.836
Lmac_2250
Hypothetical protein.
 
     0.817
grpB_1
Glutamate rich protein GrpB.
 
     0.815
Lmac_1881
Protein with TPR motifs (protein-protein interaction motif).
  
 
 0.722
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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