STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmac_2273Putative conjugative transfer protein TraI. (1945 aa)    
Predicted Functional Partners:
Lmac_1652
UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily.
  
 
 0.982
Lmac_2274
Conjugative transfer protein TraD.
 
   
 0.938
Lmac_2278
Putative conjugative transfer protein TrbB.
 
   
 0.900
Lmac_2281
Putative conjugative transfer protein TrbC.
 
     0.899
Lmac_2276
Putative sex pilus assembly and mating pair protein TraG.
 
     0.898
Lmac_2285
Putative conjugative transfer protein TraC.
 
     0.896
Lmac_2280
Conjugal transfer mating pair stabilization protein TraN.
 
    0.894
dnaN
DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...]
  
 
 0.892
Lmac_2279
Putative conjugative transfer protein TraF.
 
   
 0.890
Lmac_2287
Putative conjugative transfer protein TraB.
 
     0.883
Your Current Organism:
Legionella maceachernii
NCBI taxonomy Id: 466
Other names: ATCC 35300, CCUG 31116, CIP 103846, DSM 16642, JCM 7566, L. maceachernii, NCTC 11982, Tatlockia maceachernii, strain Px-1-G-2-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.